Marcin Poreba: search on Z-Library

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1

Small Molecule Active Site Directed Tools for Studying Human Caspases

Poreba, Marcin, Szalek, Aleksandra, Kasperkiewicz, Paulina, Rut, Wioletta, Salvesen, Guy S., Drag, Marcin

Journal:

Chemical Reviews

Year:

2015

Language:

english

File:

PDF, 24.87 MB

english, 2015

2

Profiling of flaviviral NS2B-NS3 protease specificity provides a structural basis for the development of selective chemical tools that differentiate Dengue from Zika and West Nile viruses

Rut, Wioletta, Groborz, Katarzyna, Zhang, Linlin, Modrzycka, Sylwia, Poreba, Marcin, Hilgenfeld, Rolf, Drag, Marcin

Journal:

Antiviral Research

Year:

2020

File:

PDF, 2.10 MB

2020

3

Extensive peptide and natural protein substrate screens reveal that mouse caspase-11 has much narrower substrate specificity than caspase-1

Gonzalez Ramirez, Monica L, Poreba, Marcin, Snipas, Scott J, Groborz, Katarzyna, Drag, Marcin, Salvesen, Guy S

Journal:

Journal of Biological Chemistry

Year:

2018

Language:

english

File:

PDF, 1.05 MB

english, 2018

4

Selective Substrates and Activity-Based Probes for Imaging of the Human Constitutive 20S Proteasome in Cells and Blood Samples

Rut, Wioletta, Poręba, Marcin, Kasperkiewicz, Paulina, Snipas, Scott J., Drąg, Marcin

Journal:

Journal of Medicinal Chemistry

Year:

2018

Language:

english

File:

PDF, 1.68 MB

english, 2018

5

Determination of extended substrate specificity of the MALT1 as a strategy for the design of potent substrates and activity-based probes

Kasperkiewicz, Paulina, Kołt, Sonia, Janiszewski, Tomasz, Groborz, Katarzyna, Poręba, Marcin, Snipas, Scott J., Salvesen, Guy S., Drąg, Marcin

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 3.72 MB

english, 2018

6

Effects of Intravascular Low-Level Laser Therapy During Coronary Intervention on Selected Growth Factors Levels

Derkacz, Arkadiusz, Protasiewicz, Marcin, Rola, Piotr, Podgorska, Katarzyna, Szymczyszyn, Alicja, Gutherc, Radoslaw, Poręba, Rafal, Doroszko, Adrian

Journal:

Photomedicine and Laser Surgery

Year:

2014

Language:

english

File:

PDF, 205 KB

english, 2014

7

Fluorescent probes towards selective cathepsin B detection and visualization in cancer cells and patient samples

Poreba, Marcin, Groborz, Katarzyna, Vizovisek, Matej, Maruggi, Marco, Turk, Dusan, Turk, Boris, Powis, Garth, Drag, Marcin, Salvesen, Guy

Journal:

Chemical Science

Year:

2019

Language:

english

File:

PDF, 2.93 MB

english, 2019

8

Renal Artery Stenosis in Patients With Resistant Hypertension

Protasiewicz, Marcin, Kądziela, Jacek, Początek, Karol, Poręba, Rafał, Podgórski, Maciej, Derkacz, Arkadiusz, Prejbisz, Aleksander, Mysiak, Andrzej, Januszewicz, Andrzej, Witkowski, Adam

Journal:

The American Journal of Cardiology

Year:

2013

Language:

english

File:

PDF, 404 KB

english, 2013

9

Comparison of the renal hyperemic effects of papaverine and dopamine in patients with renal artery stenosis

Protasiewicz, Marcin, Początek, Karol, Poręba, Rafał, Derkacz, Arkadiusz, Podgórski, Maciej, Gosławska, Katarzyna, Szymańska–Chabowska, Anna, Mazur, Grzegorz, Mysiak, Andrzej, Witkowski, Adam

Journal:

Journal of the American Society of Hypertension

Year:

2015

Language:

english

File:

PDF, 1.05 MB

english, 2015

10

Engineering caspase 7 as an affinity reagent to capture proteolytic products

Razai, Amir S., Snipas, Scott J., Poreba, Marcin, Fasci, Domenico, Salvesen, Guy S.

Journal:

Year:

2020

File:

PDF, 1.97 MB

2020

11

Multiplexed probing of proteolytic enzymes using mass cytometry-compatible activity-based probes.

Poreba, Marcin, Groborz, Katarzyna, Rut, Wioletta, Pore, Milind, Snipas, Scott J., vizovisek, Matej, Turk, Boris, Kuhn, Peter, Drag, Marcin, Salvesen, Guy S.

Journal:

Journal of the American Chemical Society

Year:

2020

File:

PDF, 1.64 MB

2020

12

Mechanism and specificity of the human paracaspase MALT1

Hachmann, Janna, Snipas, Scott J., van Raam, Bram J., Cancino, Erik M., Houlihan, Emily J., Poreba, Marcin, Kasperkiewicz, Paulina, Drag, Marcin, Salvesen, Guy S.

Journal:

Biochemical Journal

Year:

2012

Language:

english

File:

PDF, 782 KB

english, 2012

13

Exploring the prime site in caspases as a novel chemical strategy for understanding the mechanisms of cell death: a proof of concept study on necroptosis in cancer cells

Groborz, Katarzyna, Gonzalez Ramirez, Monica L., Snipas, Scott J., Salvesen, Guy S., Drąg, Marcin, Poręba, Marcin

Journal:

Cell Death & Differentiation

Year:

2019

Language:

english

File:

PDF, 3.12 MB

english, 2019

14

Kidney microcirculation response to adenosine stimulation in renal artery stenosis

Protasiewicz, Marcin, Początek, Karol, Podgórski, Maciej, Poręba, Rafał, Derkacz, Arkadiusz, Gosławska, Katarzyna, Kwiatkowska, Wiesława, Mazur, Grzegorz, Mysiak, Andrzej, Januszewicz, Andrzej

Journal:

Year:

2015

Language:

english

File:

PDF, 808 KB

english, 2015

15

Barrel-shaped ClpP Proteases Display Attenuated Cleavage Specificities

Gersch, Malte, Stahl, Matthias, Poreba, Marcin, Dahmen, Maria, Dziedzic, Anna, Drag, Marcin, Sieber, Stephan A.

Journal:

ACS Chemical Biology

Year:

2015

Language:

english

File:

PDF, 2.93 MB

english, 2015

16

Extended substrate specificity and first potent irreversible inhibitor/activity-based probe design for Zika virus NS2B-NS3 protease

Rut, Wioletta, Zhang, Linlin, Kasperkiewicz, Paulina, Poreba, Marcin, Hilgenfeld, Rolf, Drąg, Marcin

Journal:

Antiviral Research

Year:

2017

Language:

english

File:

PDF, 2.67 MB

english, 2017

17

Usefulness of Intravascular Low-Power Laser Illumination in Preventing Restenosis After Percutaneous Coronary Intervention

Arkadiusz Derkacz, Marcin Protasiewicz, Rafal Poreba, Andrzej Szuba, Ryszard Andrzejak

Journal:

The American Journal of Cardiology

Year:

2010

Language:

english

File:

PDF, 219 KB

english, 2010

18

Unnatural amino acids increase activity and specificity of synthetic substrates for human and malarial cathepsin C

Poreba, Marcin, Mihelic, Marko, Krai, Priscilla, Rajkovic, Jelena, Krezel, Artur, Pawelczak, Malgorzata, Klemba, Michael, Turk, Dusan, Turk, Boris, Latajka, Rafal, Drag, Marcin

Journal:

Year:

2014

Language:

english

File:

PDF, 896 KB

english, 2014

19

The Staphylococcus aureus leucine aminopeptidase is localized to the bacterial cytosol and demonstrates a broad substrate range that extends beyond leucine

Carroll, Ronan K., Veillard, Florian, Gagne, Danielle T., Lindenmuth, Jarrod M., Poreba, Marcin, Drag, Marcin, Potempa, Jan, Shaw, Lindsey N.

Journal:

Biological Chemistry

Year:

2013

Language:

english

File:

PDF, 1.04 MB

english, 2013

20

Counter Selection Substrate Library Strategy for Developing Specific Protease Substrates and Probes

Poreba, Marcin, Solberg, Rigmor, Rut, Wioletta, Lunde, Ngoc Nguyen, Kasperkiewicz, Paulina, Snipas, Scott J., Mihelic, Marko, Turk, Dusan, Turk, Boris, Salvesen, Guy S., Drag, Marcin

Journal:

Cell Chemical Biology

Year:

2016

Language:

english

File:

PDF, 3.03 MB

english, 2016

21

Caspase selective reagents for diagnosing apoptotic mechanisms

Poreba, Marcin, Groborz, Katarzyna, Navarro, Mario, Snipas, Scott J., Drag, Marcin, Salvesen, Guy S.

Journal:

Cell Death & Differentiation

Year:

2018

Language:

english

File:

PDF, 3.22 MB

english, 2018

22

Recent advances in the development of legumain-selective chemical probes and peptide prodrugs

Journal:

Biological Chemistry

Year:

2019

Language:

english

File:

PDF, 942 KB

english, 2019

23

Anticancer properties of ester derivatives of betulin in human metastatic melanoma cells (Me-45)

Drąg-Zalesińska, Małgorzata, Drąg, Marcin, Poręba, Marcin, Borska, Sylwia, Kulbacka, Julita, Saczko, Jolanta

Journal:

Cancer Cell International

Year:

2017

Language:

english

File:

PDF, 1.30 MB

english, 2017

24

Extended subsite profiling of the pyroptosis effector protein gasdermin D reveals a region recognized by inflammatory caspase-11

Bibo-Verdugo, Betsaida, Snipas, Scott J, Kolt, Sonia, Poreba, Marcin, Salvesen, Guy S

Journal:

Journal of Biological Chemistry

Year:

2020

File:

PDF, 4.42 MB

2020

25

The new esters derivatives of betulin and betulinic acid in epidermoid squamous carcinoma treatment – In vitro studies

Drąg-Zalesińska, Małgorzata, Wysocka, Teresa, Borska, Sylwia, Drąg, Marcin, Poręba, Marcin, Choromańska, Anna, Kulbacka, Julita, Saczko, Jolanta

Journal:

Biomedicine & Pharmacotherapy

Year:

2015

Language:

english

File:

PDF, 1015 KB

english, 2015

26

Effect of the intravascular low energy laser illumination during percutaneous coronary intervention on the inflammatory process in vascular wall

Derkacz, Arkadiusz, Protasiewicz, Marcin, Poręba, Rafał, Doroszko, Adrian, Andrzejak, Ryszard

Journal:

Lasers in Medical Science

Year:

2013

Language:

english

File:

PDF, 147 KB

english, 2013

27

Potent and selective caspase-2 inhibitor prevents MDM-2 cleavage in reversine-treated colon cancer cells

Poreba, Marcin, Rut, Wioletta, Groborz, Katarzyna, Snipas, Scott J., Salvesen, Guy S., Drag, Marcin

Journal:

Cell Death & Differentiation

Year:

2019

File:

PDF, 2.44 MB

2019

28

Proteaseâactivated prodrugs: strategies, challenges and future directions

Journal:

Year:

2020

Language:

english

File:

PDF, 36.90 MB

english, 2020

29

Glycosylation is important for legumain localization and processing to active forms but not for cystatin E/M inhibitory functions

Lunde, Ngoc Nguyen, Haugen, Mads Haugland, Bodin Larsen, Kristina Broe, Damgaard, Ingrid, Pettersen, Solveig J., Kasem, Roya, Rut, Wioletta, Drag, Marcin, Poreba, Marcin, Johansen, Harald Thidemann, S

Journal:

Year:

2017

Language:

english

File:

PDF, 2.88 MB

english, 2017

30

Fluorescent activity-based probe for the selective detection of Factor VII activating protease (FSAP) in human plasma

Rut, Wioletta, Nielsen, Nis Valentin, Czarna, Justyna, Poreba, Marcin, Kanse, Sandip M., Drag, Marcin

Journal:

Thrombosis Research

Year:

2019

Language:

english

File:

PDF, 1.31 MB

english, 2019

31

Selective imaging of human cathepsin L in breast cancer by fluorescent activity-based probes

Poreba, Marcin, Rut, Wioletta, Vizovisek, Matej, Groborz, Katarzyna, Kasperkiewicz, Paulina, Finlay, Darren, Vuori, Kristiina, Turk, Dusan, Turk, Boris, Salvesen, Guy, Drag, Marcin

Journal:

Chemical Science

Year:

2018

Language:

english

File:

PDF, 3.52 MB

english, 2018

32

Endoluminal Phototherapy for Prevention of Restenosis: Preliminary Results at 6-Month Follow-Up

Derkacz, Arkadiusz, Protasiewicz, Marcin, Kipshidze, Nicholas, Biały, Dariusz, Poręba, Rafał, Bereś-Pawlik, Elżbieta, Abramski, Krzysztof, Mazurek, Andwalentyna

Journal:

Photomedicine and Laser Surgery

Year:

2005

Language:

english

File:

PDF, 100 KB

english, 2005

33

An integrated approach to the ligand binding specificity of Neisseria meningitidis M1 alanine aminopeptidase by fluorogenic substrate profiling, inhibitory studies and molecular modeling

Węglarz-Tomczak, Ewelina, Poręba, Marcin, Byzia, Anna, Berlicki, Łukasz, Nocek, Bogusław, Mulligan, Rory, Joachimiak, Andrzej, Drąg, Marcin, Mucha, Artur

Journal:

Year:

2013

Language:

english

File:

PDF, 1.63 MB

english, 2013

34

Biochemical Characterization and Substrate Specificity of Autophagin-2 from the Parasite Trypanosoma cruzi

Rajkovic, Jelena, Poreba, Marcin, Caglic, Dejan, Vidmar, Robert, Wilk, Aleksandra, Borowik, Agata, Salvesen, Guy S., Turk, Vito, Drag, Marcin, Turk, Boris

Journal:

Journal of Biological Chemistry

Year:

2015

Language:

english

File:

PDF, 3.62 MB

english, 2015

35

Emerging challenges in the design of selective substrates, inhibitors and activity-based probes for indistinguishable proteases

Kasperkiewicz, Paulina, Poreba, Marcin, Groborz, Katarzyna, Drag, Marcin

Journal:

Year:

2017

Language:

english

File:

PDF, 1.46 MB

english, 2017

36

Design of a Selective Substrate and Activity Based Probe for Human Neutrophil Serine Protease 4

Kasperkiewicz, Paulina, Poreba, Marcin, Snipas, Scott J., Lin, S. Jack, Kirchhofer, Daniel, Salvesen, Guy S., Drag, Marcin, Permyakov, Eugene A.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.04 MB

english, 2015

37

A New Betulin Derivative Stimulates the Synthesis of Collagen in Human Fibroblasts Stronger than its Precursor

DRĄG-ZALESIŃSKA, MAŁGORZATA, REMBIAŁKOWSKA, NINA, BORSKA, SYLWIA, SACZKO, JOLANTA, DRĄG, MARCIN, PORĘBA, MARCIN, KULBACKA, JULITA

Journal:

Year:

2019

Language:

english

File:

PDF, 296 KB

english, 2019

38

Hydraulic characteristic of selected installation valves installed on various pipes materials

Poręba, Krystyna, Kowalczyk, Weronika, Widomski, Marcin K., Musz-Pomorska, Anna, Zimoch, I.

Journal:

E3S Web of Conferences

Year:

2018

Language:

english

File:

PDF, 504 KB

english, 2018

39

Gingipain aminopeptidase activities in Porphyromonas gingivalis

Veillard, Florian, Potempa, Barbara, Poreba, Marcin, Drag, Marcin, Potempa, Jan

Journal:

Biological Chemistry

Year:

2012

Language:

english

File:

PDF, 359 KB

english, 2012

40

Plasma asymmetric dimethylarginine predicts restenosis after coronary angioplasty

Derkacz, Arkadiusz, Protasiewicz, Marcin, Poręba, Rafał, Doroszko, Adrian, Poręba, Małgorzata, Antonowicz-Juchniewicz, Jolanta, Andrzejak, Ryszard, Szuba, Andrzej

Journal:

Archives of Medical Science

Year:

2011

Language:

english

File:

PDF, 68 KB

english, 2011

41

Probing the S1 specificity pocket of the aminopeptidases that generate antigenic peptides

Zervoudi, Efthalia, Papakyriakou, Athanasios, Georgiadou, Dimitra, Evnouchidou, Irini, Gajda, Anna, Poreba, Marcin, Salvesen, Guy S., Drag, Marcin, Hattori, Akira, Swevers, Luc, Vourloumis, Dionisios,

Journal:

Biochemical Journal

Year:

2011

Language:

english

File:

PDF, 2.13 MB

english, 2011

42

Development of an advanced nanoformulation for the intracellular delivery of a caspase-3 selective activity-based probe

Cogo, Francesco, Poreba, Marcin, Rut, Wioletta, Groborz, Katarzyna, Smyth, Peter, Johnston, Michael C., Williams, Richard, Longley, Daniel B., Burden, Roberta E., Salvesen, Guy S., Drag, Marcin, Scott

Journal:

Year:

2019

Language:

english

File:

PDF, 1.57 MB

english, 2019

43

Substrate Specificity and Possible Heterologous Targets of Phytaspase, a Plant Cell Death Protease

Galiullina, Raisa A., Kasperkiewicz, Paulina, Chichkova, Nina V., Szalek, Aleksandra, Serebryakova, Marina V., Poreba, Marcin, Drag, Marcin, Vartapetian, Andrey B.

Journal:

Journal of Biological Chemistry

Year:

2015

Language:

english

File:

PDF, 1.27 MB

english, 2015

44

Recent advances and concepts in substrate specificity determination of proteases using tailored libraries of fluorogenic substrates with unnatural amino acids

Rut, Wioletta, Kasperkiewicz, Paulina, Byzia, Anna, Poreba, Marcin, Groborz, Katarzyna, Drag, Marcin

Journal:

Biological Chemistry

Year:

2015

Language:

english

File:

PDF, 887 KB

english, 2015

45

Return of the Ice Age: Caspases Safeguard against Inflammatory Cell Death

Poreba, Marcin, Salvesen, Guy

Journal:

Cell Chemical Biology

Year:

2017

Language:

english

File:

PDF, 157 KB

english, 2017

46

Characterization of P. falciparum dipeptidyl aminopeptidase 3 specificity identifies differences in amino acid preferences between peptide‐based substrates and covalent inhibitors

de Vries, Laura E., Sanchez, Mateo I., Groborz, Katarzyna, Kuppens, Laurie, Poreba, Marcin, Lehmann, Christine, Nevins, Neysa, Withers‐Martinez, Chrislaine, Hirst, David J., Yuan, Fang, Arastu‐Kapur,

Journal:

Year:

2019

Language:

english

File:

PDF, 2.05 MB

english, 2019

47

X-ray Crystal Structure and Specificity of the Plasmodium falciparum Malaria Aminopeptidase PfM18AAP

Komagal Kannan Sivaraman, Christine A. Oellig, Kitmun Huynh, Sarah C. Atkinson, Marcin Poreba, Matthew A. Perugini, Katharine R. Trenholme, Donald L. Gardiner, Guy Salvesen, Marcin Drag, John P. Dalto

Journal:

Journal of Molecular Biology

Year:

2012

Language:

english

File:

PDF, 1.48 MB

english, 2012

48

Highly sensitive and adaptable fluorescence-quenched pair discloses the substrate specificity profiles in diverse protease families

Poreba, Marcin, Szalek, Aleksandra, Rut, Wioletta, Kasperkiewicz, Paulina, Rutkowska-Wlodarczyk, Izabela, Snipas, Scott J., Itoh, Yoshifumi, Turk, Dusan, Turk, Boris, Overall, Christopher M., Kaczmare

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.49 MB

english, 2017

49

S1 pocket fingerprints of human and bacterial methionine aminopeptidases determined using fluorogenic libraries of substrates and phosphorus based inhibitors

Marcin Poreba, Anna Gajda, Jan Picha, Jiri Jiracek, Aline Marschner, Christian D. Klein, Guy S. Salvesen, Marcin Drag

Journal:

Year:

2012

Language:

english

File:

PDF, 1.61 MB

english, 2012

50

Insights into ClpXP proteolysis: heterooligomerization and partial deactivation enhance chaperone affinity and substrate turnover in Listeria monocytogenes

Balogh, Dóra, Dahmen, Maria, Stahl, Matthias, Poreba, Marcin, Gersch, Malte, Drag, Marcin, Sieber, Stephan A.

Journal:

Chemical Science

Year:

2017

Language:

english

File:

PDF, 1.39 MB

english, 2017

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